PHOTO: 2021 IEDB Virtual User Workshop - Day 1 (28 October 2021) - Presenters on Zoom Webinar
Our team holds an annual user workshop in October/November to which we invite both those new to the IEDB as well as experienced users wanting to better understand and utilize this resource. The workshop is a great opportunity to learn about all the features of the IEDB database and tools, and to get hands-on individual support on how it can answer your research questions.
Following the success of the 2020 IEDB Virtual User Workshop, the IEDB hosted two virtual user workshops in 2021 to cater to the various time zones our users are in across the world.
Workshop 1: Thursday, Oct. 28 - Friday, Oct. 29, 2021
8am - 2pm US Pacific Time
Workshop 2: Wednesday, Nov. 3 - Thursday, Nov. 4, 2021
2pm – 8pm US Pacific Time
Each workshop was structured the same and contained identical information. These workshops were free of charge and were delivered virtually by Zoom Webinar. The available reference materials from the 2021 virtual event are outlined below.
Workshop Agenda (PDF Attachment)
- Attendee Agenda - 2021 IEDB Virtual User Workshop (Oct).pdf (93.5 KB)
- Attendee Agenda - 2021 IEDB Virtual User Workshop (Nov).pdf (94.3 KB)
Day 1 Presentations
- Introduction & Immune Epitope Database Overview
- Slides: 1.0 IEDB Welcome & Logistics 2021.pdf (2.7 MB) and 1.1 Database Overview 2021.pdf (3.8 MB)
- Video: YouTube
- Accessing the Data: Query, Reporting & Examples
- Slides: 1.2 IEDB Query, Reporting, and Examples 2021.pdf (3.3 MB)
- Video: YouTube
- SARS-CoV-2 and the ImmunomeBrowser
- Slides: 1.3 SARS-CoV-2 and the Immunome Browser 2021.pdf (1.0 MB)
- Video: YouTube
- New Database Features - Query API & Custom Exports
- Slides: 1.4 IEDB Query API (IQ-API) 2021.pdf (1.8 MB) and 1.4 IEDB Custom Export Update 2021.pdf (607.7 KB)
- Video: YouTube
- NIH Resources for Researchers: The LANL HIV Sequence Database
- Slides: 1.5 HIV Sequence Database 2021.pdf (1.4 MB)
- Video: YouTube
- The Cancer Epitope Database and Analysis Resource (CEDAR)
- Slides: 1.6 CEDAR 2021.pdf (928.4 KB)
- Video: YouTube
- Immune Epitope Analysis Resource Overview
- Slides: 1.7 IEDB Analysis Resource Overview 2021.pdf (3.2 MB)
- Video: YouTube
- Analysis Tools
- Slides: 1.8 IEDB Analysis Tools 2021.pdf (1.5 MB)
- Video: YouTube
- Day 1 Conclusion and Optional Q&A
- Slides: 1.9 Closing Remarks & Survey.pdf (665.7 KB)
- Video: YouTube
Day 2 Presentations
- Introduction & MHC Binding Predictions
- Slides: 2.0 Welcome & Overview 2021.pdf (3.9 MB) and 2.1 IEDB MHC Binding Predictions 2021.pdf (2.4 MB)
- Video: YouTube
- T Cell Processing & Immunogenicity Predictions
- Slides: 2.2 T Cell Processing and Immunogenicity Predictions 2021.pdf (1.6 MB)
- Video: YouTube
- T Cell Tool Spotlight: TCRMatch
- Slides: 2.3 TCRMatch 2021.pdf (943.9 KB)
- Video: Youtube
- Structure Tools: LYRA & SCEptRe
- Slides: 2.4 LYRA and SCEptRe 2021.pdf (3.5 MB)
- Video: Youtube
- PEPMatch: Homology of SARS-CoV-2 Spike Sequences to Myocarditis Antigens
- Slides: 2.5 IEDB PEPMatch 2021.pdf (1.0 MB)
- Video: Youtube
- NIH Resources for Researchers: The LANL HIV Immunology Database
- Slides: 2.6 HIV Immunology Database 2021.pdf (2.4 MB)
- Video: YouTube
- B Cell Epitope Prediction
- Slides: 2.7 IEDB B Cell Epitope Predictions 2021.pdf (3.4 MB)
- Video: YouTube
- IEDB Tools 3.0: Future of Tools
- Slides: 2.8 IEDB Future Of Tools 2021.pdf (3.4 MB)
- Video: YouTube
- Day 2 Conclusion and Optional Q&A
- Slides: 2.9 Closing Remarks & Survey.pdf (406.4 KB)
- Video: YouTube
Additional Resources Shared via Zoom
For more information on this or future events, contact us at iedb_workshop@lji.org or visit the informational webpage (http://workshop.iedb.org/).