PHOTO: 2020 IEDB Virtual User Workshop - Day 1 (5 November 2020) - Presenters on Zoom Webinar
Our team holds an annual user workshop in October/November to which we invite both those new to the IEDB as well as experienced users wanting to better understand and utilize this resource. The workshop is a great opportunity to learn about all the features of the IEDB database and tools, and to get hands-on individual support on how it can answer your research questions. The available reference materials from the 2020 virtual event are outlined below.
Workshop Agenda (PDF Attachment)
Day 1 Presentations
- Introduction & Immune Epitope Database Overview
- Slides: 1.0 Welcome & Logistics 2020.pdf (1.3 MB) and 1.1 Database Overview 2020.pdf (1.3 MB)
- Video: YouTube
- How Data are Retrieved, Entered, and Organized
- Slides: 1.2 How Data are Retrieved, Entered, and Organized 2020.pdf (1.7 MB)
- Video: YouTube
- Accessing the Data: Query, Reporting & Examples
- Slides: 1.3 Query, Reporting, and Examples 2020 Part1.pdf (3.9 MB) and
1.3 Query, Reporting, and Examples 2020 Part2.pdf (3.1 MB) - Video: YouTube
- NIH Resources for Researchers: LANL COVID Pipeline
- Slides: 1.4 LANL COVID Pipeline 2020 (Final).pdf (2.1 MB)
- Video: YouTube
- Immune Epitope Analysis Resource Overview
- Slides: 1.5 IEDB Analysis Resource Overview 2020.pdf (1.4 MB)
- Video: YouTube
- Analysis Tools
- Slides: 1.6 IEDB Analysis Tools 2020.pdf (1.5 MB)
- Video: YouTube
- Using the IEDB-AR to Identify SARS-CoV-2 Candidates
- Slides: 1.7 IEDB-AR SARS-CoV-2 2020.pdf (3.6 MB)
- Video: YouTube
- Day 1 Conclusion and Optional Q&A
- Slides: 1.8 Closing Remarks & Survey 2020.pdf (1.2 MB)
- Video: YouTube
Day 2 Presentations
- Introduction & MHC Binding Predictions
- Slides: 2.0 Welcome & Overview 2020.pdf (561.8 KB) and
2.1 IEDB MHC Binding Predictions 2020.pdf (2.8 MB) - Video: YouTube
- T Cell Processing & Immunogenicity Predictions
- Slides: 2.2 T Cell Processing and Immunogenicity Predictions 2020.pdf (1.8 MB)
- Video: YouTube
- T Cell Tool Spotlight: TCRMatch
- Slides: 2.3 TCRMatch 2020.pdf (818.6 KB)
- Video: Youtube
- Structure Tools: LYRA & SCEptRe
- Slides: 2.4 LYRA and SCEptRe 2020.pdf (1.1 MB)
- Video: Youtube
- NIH Resources for Researchers: HIV Sequence & Immunology Databases
- Slides: 2.5 HIV Database Workshop 2020.pdf (2.3 MB)
- Video: YouTube
- B Cell Epitope Prediction
- Slides: 2.6 B Cell Epitope Predictions 2020.pdf (3.3 MB)
- Video: YouTube
- IEDB Tools 3.0: Future of Tools
- Slides: 2.7 Future Of Tools 2020.pdf (2.4 MB)
- Video: YouTube
- Day 2 Conclusion and Optional Q&A
- Slides: 2.8 Closing Remarks & Survey 2020.pdf (787.0 KB)
- Video: YouTube
Q&A Written Responses (PDF Attachment)
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Note - these are a subset of the questions asked across the 2 days that were responded to in a written format via Zoom. The majority of questions were answered verbally, live on the day.
Additional Resources Shared via Zoom
For more information on this or future events, contact us at iedb_workshop@lji.org or visit the informational webpage (http://workshop.iedb.org/).
